These low fat thumbprint cookies are buttery without the butter, thanks to a clever mix of unsweetened applesauce and just a touch of light margarine. They’re a guilt-free treat at only 2 grams of fat per cookie, making them a sweet option for anyone watching their fat intake. Perfect for healthy snacking, festive gatherings, or even a kid-friendly baking day, these cookies bring nostalgic flavor with a nutritious twist. Naturally lower in calories and made without eggs, they’re also a good fit for lighter dessert tables and heart-smart diets.
About This Recipe
These cookies are tender, slightly chewy, and have that classic jammy center that makes every bite feel special. The fruit filling adds brightness, while the cookie itself is lightly sweet with a soft, satisfying crumb.
You’ll love how easy these are to whip up with just a few wholesome ingredients. They’re ideal for make-ahead batches during the holidays or anytime you need a quick, crowd-pleasing low-fat dessert.
Why This Recipe Belongs in Your Diet
Using unsweetened applesauce instead of butter cuts down saturated fat dramatically while still giving the cookies moisture and structure. You get the sweet satisfaction of a classic cookie with a fraction of the fat—perfect for staying on track without feeling deprived.
What You’ll Need (Ingredients)
These thumbprint cookies come together with everyday ingredients and your favorite fruit jam—nothing fancy required.
- All-Purpose Flour (1 1/2 cups): Provides structure for the cookies. Spoon and level for accurate measuring.
- Baking Powder (1/2 teaspoon): Gives the cookies a little lift so they’re not too dense.
- Salt (1/4 teaspoon): Enhances the flavor and balances the sweetness.
- Unsweetened Applesauce (1/3 cup): Replaces most of the fat and keeps the cookies moist.
- Light Margarine or Spread (2 tablespoons, softened): Adds just enough richness for a tender bite.
- Granulated Sugar (1/3 cup): Just enough to sweeten the dough without overpowering it.
- Vanilla Extract (1 teaspoon): Adds a warm, familiar cookie flavor.
- Your Favorite Fruit Jam (about 1/4 cup): Choose a no-sugar-added jam for an even lighter option.
How to Make Low Fat Thumbprint Cookies
- Preheat oven to 350°F and line a baking sheet with parchment paper.
- Mix dry ingredients: In a bowl, whisk together flour, baking powder, and salt.
- Cream wet ingredients: In a separate bowl, stir together applesauce, light margarine, sugar, and vanilla until smooth.
- Combine wet and dry ingredients until a soft dough forms.
- Scoop dough into 1-inch balls and place on the prepared baking sheet.
- Make thumbprints: Use your thumb or the back of a teaspoon to press an indent into the center of each ball.
- Fill centers with about 1/2 teaspoon of jam.
- Bake for 12 to 14 minutes, or until edges are lightly golden.
- Cool completely on a wire rack before serving.

Recipe Tips and Variations
- Swap in whole wheat flour for a nuttier flavor and more fiber.
- Try different jams: raspberry, apricot, and strawberry all work beautifully.
- Add a tiny pinch of cinnamon to the dough for warmth.
- For a firmer texture, chill the dough for 30 minutes before shaping.
How to Store Leftovers
Store in an airtight container at room temperature for up to 4 days. For longer storage, freeze in a single layer, then transfer to a zip-top bag and freeze for up to 2 months.
Nutrition Facts
- Serving Size: 1 cookie
- Calories: 78 kcal
- Fat: 2 g
- Carbohydrates: 13 g
- Protein: 1 g
- Sodium: 55 mg
Try More Recipes:
- Low Fat Snickerdoodle Cookies
- Low Fat Peanut Butter Chocolate Chip Cookies
- Low Fat Oatmeal Cookies with Yogurt

Low Fat Thumbprint Cookies
Description
Classic jam-filled cookies with just 2 grams of fat each—a light, sweet treat you can feel good about.
Ingredients
Instructions
- Preheat oven to 350°F. Line a baking sheet with parchment paper.
- Whisk flour, baking powder, and salt in a bowl.
- In another bowl, stir applesauce, margarine, sugar, and vanilla until smooth.
- Combine wet and dry ingredients into a soft dough.
- Roll dough into 1-inch balls and place on the sheet.
- Press a thumbprint into each ball.
- Fill with jam.
- Bake 12–14 minutes until lightly golden.
- Cool completely on a wire rack.